After Rieppel & deBraga, 1996, deBraga & Rieppel, 1997, Gao & Fox, 1999, Rieppel, 2000 and Zardoya & Meyer, 2001

<==o Sauria Gauthier, 1984 sensu Rieppel & deBraga, 1996 and Gao & Fox, 1999
   |?- †Thalattosauriformes sensu Nicholls, 1999
   |--o Lepidosauromorpha Gauthier, Estes & deQueiroz, 1988
   |  |-- †Acerosodonosaurus [Acerosodontosauridae]
   |  |-- Lepidosauriformes Gauthier, Estes & deQueiroz, 1988 (liskomaiset matelijat; lizard-like diapsids) [family-level taxonomy]
   |  `--+?- Testudinata sensu Rieppel & deBraga, 1996, deBraga & Rieppel, 1997 [Chelonia, Testudines] (turtles & tortoises; kilpikonnat)
   |     `-- †Sauropterygia (joutsenliskomaiset matelijat; plesiosaur-like diapsids) [family-level taxonomy] 
   `--o Archosauromorpha von Huene, 1946 [alternative phylogeny of Archosauromorpha after Sues, 2003]
      |?- Testudinata sensu Zardoya & Meyer 2001 [Chelonia, Testudines] (kilpikonnat)
      |--+-- Archosauriformes (archosaurs and relatives; arkosaurimaiset matelijat)
      |  `--+-- †Protorosauria [Prolacertiformes]
      |     `?- †Choristodera sensu Gao & Fox, 1999
      `--+-- †Rhynchosauria
         `--+?- †Teraterpeton hrynewichorum Sues, 2003 [Teraterpetonidae Sues, 2003]
            `-- †Trilophosauria Gregory, 1945 sensu Romer, 1956

Note:

Some recent phylogenetic analysis based on both morphology and genetics have given a result, in which turtles are derived diapsids, either a sistergroup of Archosauria (Zardoya & Meyer 2001) or Sauropterygia (Rieppel & deBraga, 1996, deBraga & Rieppel, 1997).

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