After Nelson, 1994, with Recent species from Froese & Pauly, 2001 [“The Fishbase”]

<==o Gobiidae (gobies; tokot) [N: ~800 species] [FB: 1153]
   |?- †Eogottus M. Eoc. Eu.
   |?- Afurcagobius suppositus (Sauvage, 1880) (Long-headed goby)
   |?- Akko dionaea Birdsong & Robins, 1995
   |?-o Amblychaeturichthys [2]
   |  |-- A. hexanema (Bleeker, 1853)
   |  `-- A. sciistius (Jordan & Snyder, 1901)
   |?- Amblyeleotris [24]
   |?-o Amoya [2]
   |  |-- A. moloanus (Herre, 1927)
   |  `-- A. signata (Peters, 1855) (Tusk goby)
   |?- Anatirostrum profundorum (Berg, 1927)
   |?-o Apocryptodon [2]
   |  |-- A. madurensis (Bleeker, 1849)
   |  `-- A. punctatus Tomiyama, 1934
   |?-o Arenigobius [2]
   |  |-- A. bifrenatus (Kner, 1865)
   |  `-- A. frenatus (Günther, 1861) (Half-bridled goby)
   |?- Aruma histrio (Jordan, 1884) Slow goby
   |?- Asra turcomanus Iljin, 1941
   |?-o Aulopareia [2]
   |  |-- A. janetae Smith, 1945 (Scalycheek goby)
   |  `-- A. unicolor (Valenciennes, 1837)
   |?- Austrolethops wardi Whitley, 1935 (Small-eyed goby)
   |?- Barbuligobius boehlkei Lachner & McKinney, 1974
   |?- Benthophiloides brauneri Beling & Iljin, 1927
   |?-o Benthophilus [13]
   |  |-- B. baeri Kessler, 1877
   |  |-- B. ctenolepidus Kessler, 1877
   |  |-- B. granulosus Kessler, 1877
   |  |--o B. grimmi Kessler, 1877
   |  |  |-- B. g. grimmi Kessler, 1877
   |  |  `-- B. g. kessleri Berg, 1927
   |  |-- B. leptocephalus Kessler, 1877
   |  |-- B. leptorhynchus Kessler, 1877
   |  |-- B. macrocephalus (Pallas, 1788) (Caspian tadpole goby)
   |  |-- B. magistri Iljin, 1927 (Azov tadpole goby)
   |  |-- B. mahmudbejovi Ragimov, 1976
   |  |-- B. spinosus Kessler, 1877
   |  |-- B. stellatus (Sauvage, 1874) (Stellate tadpole-goby)
   |  `-- B. svetovidovi Pinchuk & Rahimov, 1979
   |?-o Bryaninops [10]
   |  |-- B. amplus Larson, 1985 (Large whip goby)
   |  |-- B. dianneae Larson, 1985
   |  |-- B. erythrops (Jordan & Seale, 1906) (Erythrops goby)
   |  |-- B. isis Larson, 1985
   |  |-- B. loki Larson, 1985 (Loki whip-goby)
   |  |-- B. natans Larson, 1985 (Redeye goby)
   |  |-- B. nexus Larson, 1987
   |  |-- B. ridens Smith, 1959
   |  |-- B. tigris Larson, 1985 (Black coral goby)
   |  `-- B. yongei (Davis & Cohen, 1969)(Whip coral goby)
   |?-o Buenia [2]
   |  |-- B. affinis Iljin, 1930 (De Buen's goby)
   |  `-- B. jeffreysii (Günther, 1867) (Jeffrey's goby)
   |?-o Cabillus [2]
   |  |-- C. lacertops Smith, 1959
   |  `-- C. tongarevae (Fowler, 1927) (Tongareva goby)
   |?- Caecogobius cryptophthalmus Berti & Ercolini, 1991
   |?-o Caffrogobius [7]
   |  |-- C. agulhensis (Barnard, 1927) (Agulhas goby)
   |  |-- C. caffer (Günther, 1874)
   |  |-- C. dubius (Smith, 1959)
   |  |-- C. gilchristi (Boulenger, 1898) (Prison goby)
   |  |-- C. natalensis (Günther, 1874) (Baldy)
   |  |-- C. nudiceps (Valenciennes, 1837) (Barehead goby)
   |  `-- C. saldanha (Barnard, 1927) (Commafin goby)
   |?-o Calamiana [2]
   |  |-- C. aliceae (Smith, 1945)
   |  `-- C. siamensis (Fowler, 1934)
   |?- Callogobius [21]
   |?- Caragobioides geomys (Fowler, 1935)
   |?- Caspiosoma caspium (Kessler, 1877)
   |?-o Chaenogobius [6]
   |  |-- C. annularis Gill, 1859 (Forktongue goby)
   |  |-- C. cylindricus Tomiyama, 1936
   |  |-- C. heptacanthus (Hilgendorf, 1879)
   |  |-- C. isaza Tanaka, 1916
   |  |-- C. taranetzi Pinchuk, 1978
   |  `-- C. uchidai (Takagi, 1957)
   |?- Chaeturichthys stigmatias Richardson, 1844
   |?- Chiramenu fluviatilis Rao, 1971
   |?-o Chlamydogobius [4]
   |  |-- C. eremius (Zietz, 1896) (Desert goby)
   |  |-- C. gloveri Larson, 1995 (Dalhousie goby)
   |  |-- C. micropterus Larson, 1995
   |  `-- C. squamigenus Larson, 1995 (Edgbaston goby)
   |?-o Chonophorus [2]
   |  |-- C. macrorhynchus (Bleeker, 1867)
   |  `-- C. pallidus (Valenciennes, 1837)
   |?-o Chriolepis [10]
   |  |-- C. atrimelum Bussing, 1997
   |  |-- C. benthonis Ginsburg, 1953
   |  |-- C. cuneata Bussing, 1990
   |  |-- C. dialepta Bussing, 1990
   |  |-- C. fisheri Herre, 1942 (Translucent goby)
   |  |-- C. lepidotus Findley, 1975
   |  |-- C. minutillus Gilbert, 1892 (Rubble goby)
   |  |-- C. tagus Ginsburg, 1953 (Mystery goby)
   |  |-- C. vespa Hastings & Bortone, 1981 (Wasp goby)
   |  `-- C. zebra Ginsburg, 1938 (Gecko goby)
   |?-o Chromogobius De Buen, 1930 [2]
   |  |-- C. quadrivittatus (Steindachner, 1863) (Chestnut goby)
   |  |-- C. zebratus (Kolombatovic, 1891) [Gobius depressus Kolombatovic, 1890] (Kolombatovic's goby)
   |  `-- C. britoi Van Tassell, 2001 [C. britoi Van Tassell, (in prep.); Brito, 1991 (nomen nudum)] (Canary Islands Chromogobius)
   |?-o Clariger [4]
   |  |-- C. chionomaculatus Shiogaki, 1988
   |  |-- C. cosmurus Jordan & Snyder, 1901
   |  |-- C. exilis Snyder, 1911
   |  `-- C. papillosus Ebina, 1935
   |?-o Corcyrogobius [2]
   |  |-- C. liechtensteini (Kolombatovic, 1891) (Liechtenstein's goby)
   |  `-- C. lubbocki Miller, 1988
   |?-o Cristatogobius [2]
   |  |-- C. gobioides (Ogilby, 1886)
   |  `-- C. nonatoae (Ablan, 1940)
   |?- Croilia mossambica Smith, 1955 (Burrowing goby)
   |?-o Cryptocentroides [2]
   |  |-- C. arabicus (Gmelin, 1789) (Arabian goby)
   |  `-- C. insignis (Seale, 1910) (Insignia prawn-goby)
   |?- Cryptocentrus [21]
   |?-o Ctenogobiops [6]
   |  |-- C. aurocingulus (Herre, 1935) (Gold-streaked prawn-goby)
   |  |-- C. crocineus Smith, 1959
   |  |-- C. feroculus Lubbock & Polunin, 1977 (Sandy prawn-goby)
   |  |-- C. maculosus (Fourmanoir, 1955)
   |  |-- C. pomastictus Lubbock & Polunin, 1977 (Gold-specked prawn-goby)
   |  `-- C. tangaroai Lubbock & Polunin, 1977 (Tangaroa)
   |?-o Ctenogobius [8]
   |  |-- C. cervicosquamus Wu & Ni, 1986
   |  |-- C. duospilus Herre, 1935
   |  |-- C. fasciatus Gill, 1858
   |  |-- C. lepturus (Pfaff, 1933)
   |  |-- C. manglicola (Jordan & Starks, 1895)
   |  |-- C. pseudofasciatus (Gilbert & Randall, 1971) (Slashcheek goby)
   |  |-- C. sagittula (Günther, 1861) (Longtail goby)
   |  `-- C. smaragdus (Valenciennes, 1837) (Emerald goby)
   |?-o Deltentosteus [2]
   |  |-- D. collonianus (Risso, 1820) (Toothed goby)
   |  `-- D. quadrimaculatus (Valenciennes, 1837) (Four-spotted goby)
   |?-o Didogobius [4]
   |  |-- D. bentuvii Miller, 1966 (Ben-Tuvia's goby)
   |  |-- D. kochi Van Tassell, 1988
   |  |-- D. schlieweni Miller, 1993
   |  `-- D. splechtnai Ahnelt & Patzner, 1995
   |?- Discordipinna griessingeri Hoese & Fourmanoir, 1978 (Spikefin goby)
   |?-o Drombus [5]
   |  |-- D. globiceps (Hora, 1923)
   |  |-- D. key (Smith, 1947) (Key goby)
   |  |-- D. kranjiensis (Herre, 1940)
   |  |-- D. simula (Smith, 1960) (Pinafore goby)
   |  `-- D. triangularis (Weber, 1909)
   |?- Ebomegobius goodi Herre, 1946
   |?- Echinogobius hayashii Iwata, Hosoya & Niimura, 1998
   |?-o Economidichthys [2]
   |  |-- E. pygmaeus (Holly, 1929)
   |  `-- E. trichonis Economidis & Miller, 1990
   |?- Ego zebra Randall, 1994
   |?-o Elacatinus [7]
   |  |-- E. atronasum (Böhlke & Robins, 1968)
   |  |-- E. digueti (Pellegrin, 1901) (Banded cleaner goby)
   |  |-- E. figaro Sazima, Moura & Rosa, 1997 (Barber goby)
   |  |-- E. inornatus Bussing, 1990 (Inornate goby)
   |  |-- E. janssi Bussing, 1981 (Spotback goby)
   |  |-- E. nesiotes Bussing, 1990
   |  `-- E. puncticulatus (Ginsburg, 1938)
   |?- Eleotrica cableae Ginsburg, 1933 (Cable's goby)
   |?-o Enypnias [2]
   |  |-- E. aceras Ginsburg, 1939
   |  `-- E. seminudus (Günther, 1861)
   |?- Eutaeniichthys gilli Jordan & Snyder, 1901
   |?-o Evermannia [4]
   |  |-- E. erici Bussing, 1983
   |  |-- E. longipinnis (Steindachner, 1879)
   |  |-- E. panamensis Gilbert & Starks, 1904
   |  `-- E. zosterura (Jordan & Gilbert, 1882)
   |?-o Exyrias [3]
   |  |-- E. belissimus (Smith, 1959) (Mud reef-goby)
   |  |-- E. ferrarisi Murdy, 1985
   |  `-- E. puntang (Bleeker, 1851) (Puntang goby)
   |?-o Favonigobius [5]
   |  |-- F. aliciae (Herre, 1936)
   |  |-- F. exquisitus Whitley, 1950 (Exquisite sand-goby)
   |  |-- F. gymnauchen (Bleeker, 1860)
   |  |-- F. lateralis (Macleay, 1881)
   |  `-- F. tamarensis (Johnston, 1883) (Tamar River goby)
   |?- Feia nympha Smith, 1959
   |?-o Flabelligobius [2]
   |  |-- F. fourmanoiri Smith, 1956
   |  `-- F. latruncularius (Klausewitz, 1974) (Fan shrimp-goby)
   |?- Fusigobius aureus Chen & Shao, 1997
   |?- Gammogobius steinitzi Bath, 1971 (Steinitz's goby)
   |?-o Garmannia [3]
   |  |-- G. saucra Robins, 1960 (Leopard goby)
   |  |-- G. schultzi Ginsburg, 1944
   |  `-- G. spilota Ginsburg, 1939 (Isthmian goby)
   |?- Ginsburgellus novemlineatus (Fowler, 1950) (Nineline goby)
   |?- Gladiogobius ensifer Herre, 1933 (Gladiator goby)
   |?- Glossogobius [23]
   |?-o Gobiodon [15]
   |  |-- G. acicularis Harold & Winterbottom, 1995
   |  |-- G. albofasciatus Sawada & Arai, 1972 (Whitelined coral goby)
   |  |-- G. atrangulatus Garman, 1903
   |  |-- G. brochus Harold & Winterbottom, 1999
   |  |-- G. citrinus (Rüppell, 1838) (Poison goby)
   |  |-- G. heterospilos Bleeker, 1856
   |  |-- G. histrio (Valenciennes, 1837) (Broad-barred goby)
   |  |-- G. micropus Günther, 1861
   |  |-- G. multilineatus Wu, 1979
   |  |-- G. oculolineatus Wu, 1979
   |  |-- G. okinawae Sawada, Arai & Abe, 1972 (Okinawa goby)
   |  |-- G. quinquestrigatus (Valenciennes, 1837) (Five-lined coral goby)
   |  |-- G. reticulatus Playfair, 1867 (Reticulate goby)
   |  |-- G. rivulatus (Rüppell, 1830) (Rippled coralgoby)
   |  `-- G. spilophthalmus Fowler, 1944 (White-lined coral goby)
   |?- Gobiusculus flavescens (Fabricius, 1779) [Coryphopterus flavescens] (seitsenruototokko; Two-spotted goby)
   |?- Gorogobius nigricinctus (Delais, 1951)
   |?- Gymneleotris seminuda (Günther, 1864) (Splitbanded goby)
   |?-o Gymnogobius [6]
   |  |-- G. castaneus (O'Shaughnessy, 1875) (Biringo)
   |  |-- G. laevis (Steindachner, 1879)
   |  |-- G. macrognathos (Bleeker, 1860)
   |  |-- G. mororanus (Jordan & Snyder, 1901)
   |  |-- G. raninus Taranetz, 1934
   |  `-- G. urotaenia (Hilgendorf, 1879)
   |?-o Hazeus [2]
   |  |-- H. maculipinna (Randall & Goren, 1993)
   |  `-- H. otakii Jordan & Snyder, 1901
   |?-o Hemigobius [3]
   |  |-- H. bleekeri Koumans, 1953
   |  |-- H. crassa (Herre, 1945)
   |  `-- H. hoevenii (Bleeker, 1851)
   |?- Heterogobius chiloensis (Guichenot, 1848)
   |?- Heteroplopomus barbatus (Tomiyama, 1934)
   |?- Hypogymnogobius xanthozona (Bleeker, 1849) [Brachygobius xanthozona?] (kimalaistokko; Bumblebee fish)
   |?- Hyrcanogobius bergi Iljin, 1928
   |?-o Kelloggella [3]
   |  |-- K. cardinalis Jordan & Seale, 1906 (Cardinal goby)
   |  |-- K. oligolepis (Jenkins, 1903)
   |  `-- K. quindecimfasciata (Fowler, 1946) (Central goby)
   |--o Knipowitschia [12]
   |  |-- K. cameliae Nalbant & Otel, 1995
   |  |-- K. caucasica (Berg, 1916)
   |  |-- K. croatica Mrakovcic, Kerovec, Misetic & Schneider, 1996
   |  |-- K. ephesi Ahnelt, 1995
   |  |-- K. goerneri Ahnelt, 1991
   |  |-- K. iljini Berg, 1931
   |  |-- K. longecaudata (Kessler, 1877)
   |  |-- K. milleri (Ahnelt & Bianco, 1990)
   |  |-- K. mrakovcici Miller, 1991
   |  |-- K. panizzae (Verga, 1841)
   |  |-- K. punctatissima (Canestrini, 1864)
   |  `-- K. thessala (Vinciguerra, 1921)
   |?-o Lebetus [2]
   |  |-- L. guilleti (Le Danois, 1913) (Guillet's goby)
   |  `-- L. scorpioides (Collett, 1874) (Diminutive goby)
   |?-o Lesueurigobius [5]
   |  |-- L. friesii (Malm, 1874) (Fries's goby)
   |  |-- L. heterofasciatus Maul, 1971
   |  |-- L. koumansi (Norman, 1935)
   |  |-- L. sanzoi (de Buen, 1918) (Sanzo's goby)
   |  `-- L. suerii (Risso, 1810) (Lesueur's goby)
   |?- Leucopsarion petersii Hilgendorf, 1880
   |?- Lobulogobius omanensis Koumans, 1944 (Oman goby)
   |?- Lotilia graciliosa Klausewitz, 1960 (Whitecap goby)
   |?-o Lubricogobius [2]
   |  |-- L. exiguus Tanaka, 1915
   |  `-- L. pumilus Larson & Hoese, 1980
   |?-o Luciogobius [10]
   |  |-- L. albus Regan, 1940
   |  |-- L. dormitoris Shiogaki & Dotsu, 1976
   |  |-- L. elongatus Regan, 1905
   |  |-- L. grandis Arai, 1970
   |  |-- L. guttatus Gill, 1859 (Flat-headed goby)
   |  |-- L. koma (Snyder, 1909)
   |  |-- L. pallidus Regan, 1940
   |  |-- L. parvulus (Snyder, 1909)
   |  |-- L. platycephalus Shiogaki & Dotsu, 1976
   |  `-- L. saikaiensis Dôtu, 1957
   |?- Luposicya lupus Smith, 1959
   |?- Macrodontogobius wilburi Herre, 1936 (Largetooth goby)
   |?- Mahidolia mystacina (Valenciennes, 1837) (Flagfin prawn goby)
   |?- Mangarinus waterousi Herre, 1943
   |?-o Mauligobius [2]
   |  |-- M. maderensis (Valenciennes, 1837)
   |  `-- M. nigri (Günther, 1861)
   |?-o Mesogobius [3]
   |  |-- M. batrachocephalus (Pallas, 1814) (Knout goby)
   |  |-- M. nigronotatus (Kessler, 1877)
   |  `-- M. nonultimus (Iljin, 1936)
   |?- Millerigobius macrocephalus (Kolombatovic, 1891)
   |?-o Myersina [3]
   |  |-- M. lachneri Hoese & Lubbock, 1982
   |  |-- M. macrostoma Herre, 1934
   |  `-- M. nigrivirgata Akihito & Meguro, 1983
   |?-o Nesogobius [2]
   |  |-- N. hinsbyi (McCulloch & Ogilby, 1919) (Tasmanian orange-spotted sand-goby)
   |  `-- N. pulchellus (Castelnau, 1872) (Australian sailfin goby)
   |?- Obliquogobius turkayi Goren, 1992
   |?- Odondebuenia balearica (Pellegrin & Fage, 1907) (Coralline goby)
   |?- Odontamblyopus rubicundus (Hamilton, 1822)
   |?-o Oligolepis [4]
   |  |-- O. acutipennis (Valenciennes, 1837) (Sharptail goby)
   |  |-- O. cylindriceps (Hora, 1923)
   |  |-- O. keiensis (Smith, 1938) (Kei goby)
   |  `-- O. stomias (Smith, 1941)
   |?-o Ophiogobius [2]
   |  |-- O. jenynsi Hoese, 1976
   |  `-- O. ophicephalus (Jenyns, 1842)
   |?- Oplopomops diacanthus (Schultz, 1943) Hole goby
   |?-o Oplopomus [2]
   |  |-- O. caninoides (Bleeker, 1852)
   |  `-- O. oplopomus (Valenciennes, 1837) (Spinecheek goby)
   |?-o Opua [3]
   |  |-- O. atherinoides (Peters, 1855)
   |  |-- O. elati (Goren, 1984)
   |  `-- O. nephodes Jordan, 1925 (Cloudy goby)
   |?-o Oxyurichthys [14]
   |  |-- O. formosanus Nichols, 1958
   |  |-- O. guibei Smith, 1959
   |  |-- O. heisei Pezold, 1998 (Ribbon goby)
   |  |-- O. jaarmani Weber, 1913
   |  |-- O. lemayi (Smith, 1947) (Lace goby)
   |  |-- O. lonchotus (Jenkins, 1903)
   |  |-- O. microlepis (Bleeker, 1849) (Maned goby)
   |  |-- O. ophthalmonemus (Bleeker, 1856-57) (Eyebrow goby)
   |  |-- O. papuensis (Valenciennes, 1837) (Frogface goby)
   |  |-- O. paulae Pezold, 1998 (Jester goby)
   |  |-- O. saru Tomiyama, 1936
   |  |-- O. takagi Pezold, 1998
   |  |-- O. tentacularis (Valenciennes, 1837)
   |  `-- O. visayanus Herre, 1927
   |?-o Padogobius [3]
   |  |-- P. bonelli (Bonaparte, 1846)
   |  |-- P. martensii (Günther, 1861)
   |  `-- P. nigricans (Canestrini, 1867) (Arno goby)
   |?-o Palutrus [2]
   |  |-- P. meteori (Klausewitz & Zander, 1967) (Meteor goby)
   |  `-- P. reticularis Smith, 1959
   |?-o Papillogobius [3]
   |  |-- P. melanobranchus (Fowler, 1934) (Blackthroat goby)
   |  |-- P. punctatus Gill & Miller, 1990
   |  `-- P. reichei (Bleeker, 1853) (Indo-Pacific tropical sand goby)
   |?- Parachaeturichthys polynema (Bleeker, 1853) Taileyed goby
   |?-o Paragobiodon [5]
   |  |-- P. echinocephalus (Rüppell, 1830) (Redhead goby)
   |  |-- P. lacunicolus (Kendall & Goldsborough, 1911) (Blackfin coral goby)
   |  |-- P. melanosomus (Bleeker, 1852)
   |  |-- P. modestus (Regan, 1908) (Warthead goby)
   |  `-- P. xanthosoma (Bleeker, 1852) (Emerald coral goby)
   |?-o Parapocryptes [2]
   |  |-- P. rictuosus (Valenciennes, 1837)
   |  `-- P. serperaster (Richardson, 1846)
   |?-o Paratrimma [2]
   |  |-- P. nigrimenta Hoese & Brothers, 1976
   |  `-- P. urospila Hoese & Brothers, 1976
   |?- Parawaous megacephalus (Fowler, 1905)
   |?- Pariah scotius Böhlke, 1969 (Peppered goby)
   |?- Platygobiopsis akihito Springer & Randall, 1992
   |?-o Pleurosicya [12]
   |  |-- P. annandalei Hornell & Fowler, 1922 (Scalynape goby)
   |  |-- P. bilobatus (Koumans, 1941) (Bilobed ghost goby)
   |  |-- P. boldinghi Weber, 1913
   |  |-- P. carolinensis Larson, 1990
   |  |-- P. coerulea Larson, 1990
   |  |-- P. elongata Larson, 1990 (Cling goby)
   |  |-- P. fringilla Larson, 1990
   |  |-- P. micheli Fourmanoir, 1971
   |  |-- P. mossambica Smith, 1959 (Toothy goby)
   |  |-- P. muscarum (Jordan & Seale, 1906) (Ghost goby)
   |  |-- P. plicata Larson, 1990
   |  `-- P. prognatha Goren, 1984
   |?- Polyspondylogobius sinensis Kimura & Wu, 1994
   |?- Porogobius schlegelii (Günther, 1861)
   |?-o Proterorhinus [2]
   |  |-- P. marmoratus (Pallas, 1814) (Tubenose goby)
   |  `-- P. semipellucidus (Kessler, 1877)
   |?- Protogobius attiti Watson & Pöllabauer, 1998
   |?- Psammogobius knysnaensis Smith, 1935 (Knysna sandgoby)
   |?- Pseudaphya ferreri (de Buen & Fage, 1908) (Ferrer's goby)
   |?-o Pseudapocryptes [2]
   |  |-- P. borneensis (Bleeker, 1855)
   |  `-- P. elongatus (Cuvier, 1816)
   |?-o Pseudogobiopsis [4]
   |  |-- P. campbellianus (Jordan & Seale, 1907)
   |  |-- P. neglectus (Koumans, 1932)
   |  |-- P. oligactis (Bleeker, 1875)
   |  `-- P. penango (Popta, 1922)
   |?-o Pseudogobius [6]
   |  |-- P. avicennia (Herre, 1940)
   |  |-- P. javanicus (Bleeker, 1856)
   |  |-- P. masago (Tomiyama, 1936)
   |  |-- P. olorum (Sauvage, 1880) (Swan river goby)
   |  |-- P. oratai (Herre, 1940)
   |  `-- P. poicilosoma (Bleeker, 1849)
   |?- Pseudotrypauchen multiradiatus Hardenberg, 1931
   |?- Psilogobius mainlandi Baldwin, 1972
   |?-o Psilotris [5]
   |  |-- P. alepis Ginsburg, 1953 (Scaleless goby)
   |  |-- P. batrachodes Böhlke, 1963 (Toadfish goby)
   |  |-- P. boehlkei Greenfield, 1993
   |  |-- P. celsus Böhlke, 1963 (Highspine goby)
   |  `-- P. kaufmani Greenfield, Findley & Johnson, 1993
   |?-o Pterogobius [4]
   |  |-- P. elapoides (Günther, 1872)
   |  |-- P. virgo (Temminck & Schlegel, 1845)
   |  |-- P. zacalles Jordan & Snyder, 1901
   |  `-- P. zonoleucus Jordan & Snyder, 1901
   |?-o Pycnomma [2]
   |  |-- P. roosevelti Ginsburg, 1939
   |  `-- P. semisquamatum Rutter, 1904 (Secret goby)
   |?-o Redigobius [14]
   |  |-- R. amblyrhynchus (Bleeker, 1878)
   |  |-- R. balteatops (Smith, 1959) (Bull goby)
   |  |-- R. balteatus (Herre, 1935)
   |  |-- R. bikolanus (Herre, 1927) (Speckled goby)
   |  |-- R. chrysosoma (Bleeker, 1875)
   |  |-- R. dewaali (Weber, 1897) (Checked goby)
   |  |-- R. dispar (Peters, 1869)
   |  |-- R. horiae (Herre, 1936)
   |  |-- R. isognathus (Bleeker, 1878)
   |  |-- R. macrostoma (Günther, 1861) (Large-mouth goby)
   |  |-- R. pongolensis (Kok & Blaber, 1977)
   |  |-- R. roemeri (Weber, 1911) (Roemer's goby)
   |  |-- R. sapangus (Herre, 1927)
   |  `-- R. tambujon (Bleeker, 1854)
   |?- Rhinogobiops nicholsii (Bean, 1882) (Blackeye goby)
   |?- Sagamia geneionema (Hilgendorf, 1879)
   |?-o Scartelaos [4]
   |  |-- S. cantoris (Day, 1871)
   |  |-- S. gigas Chu & Wu, 1963
   |  |-- S. histophorus (Valenciennes, 1837) (Walking goby)
   |  `-- S. tenuis (Day, 1876) (Indian Ocean slender mudskipper)
   |?-o Schismatogobius [5]
   |  |-- S. ampluvinculus Chen, Shao & Fang, 1995
   |  |-- S. bruynisi de Beaufort, 1912
   |  |-- S. deraniyagalai Kottelat & Pethiyagoda, 1989 (Redneck goby)
   |  |-- S. marmoratus (Peters, 1869)
   |  `-- S. roxasi Herre, 1936
   |?- Signigobius biocellatus Hoese & Allen, 1977 (Twinspot goby)
   |?-o Silhouettea [6]
   |  |-- S. aegyptia (Chabanaud, 1933)
   |  |-- S. chaimi Goren, 1978
   |  |-- S. dotui (Takagi, 1957)
   |  |-- S. indicus Visweswara Rao, 1971
   |  |-- S. insinuans Smith, 1959 (Phantom goby)
   |  `-- S. sibayi Farquharson, 1970 (Barebreast goby)
   |?- Siphonogobius nue Shibukawa & Iwata, 1998
   |?- Speleogobius trigloides Zander & Jelinek, 1976 (Grotto goby)
   |?-o Stenogobius [11]
   |  |-- S. beauforti (Weber, 1907) (Beaufort's goby)
   |  |-- S. blokzeyli (Bleeker, 1861)
   |  |-- S. genivittatus (Valenciennes, 1837) (Chinstripe goby)
   |  |-- S. gymnopomus (Bleeker, 1853)
   |  |-- S. hawaiiensis Watson, 1991
   |  |-- S. ingeri Watson, 1991
   |  |-- S. kenyae Smith, 1959 (Africa rivergoby)
   |  |-- S. kyphosus Watson, 1991
   |  |-- S. lachneri Allen, 1991 (Bintuni goby)
   |  |-- S. laterisquamatus (Weber, 1907)
   |  `-- S. mekongensis Watson, 1991
   |?-o Stenogobius [6]
   |  |-- S. ophthalmoporus (Bleeker, 1853)
   |  |-- S. dracula Polunin & Lubbock, 1977 (Dracula shrimp-goby)
   |  |-- S. medon Hoese & Randall, 1982
   |  |-- S. nematodes Hoese & Randall, 1982 (Filament-finned prawn-goby)
   |  |-- S. pentafasciata Iwata & Hirata, 1994
   |  `-- S. xanthorhinica Hoese & Randall, 1982 (Yellownose prawn-goby)
   |?- Sueviota lachneri Winterbottom & Hoese, 1988
   |?- Sufflogobius bibarbatus (von Bonde, 1923) (Pelagic goby)
   |?- Suruga fundicola Jordan & Snyder, 1901
   |?- Synechogobius ommaturus (Richardson, 1845) (Asian freshwater goby)
   |?-o Tamanka [4]
   |  |-- T. cagayanensis (Aurich, 1938)
   |  |-- T. maculata Aurich, 1938
   |  |-- T. sarasinorum (Boulenger, 1897) (Sarasin's goby)
   |  `-- T. siitensis Herre, 1927
   |?-o Tasmanogobius [2]
   |  |-- T. gloveri Hoese, 1991 (Marine goby)
   |  `-- T. lordi Scott, 1935 (Lord's goby)
   |?-o Thorogobius [4]
   |  |-- T. angolensis (Norman, 1935)
   |  |-- T. ephippiatus (Lowe, 1839) (Leopard-spotted goby)
   |  |-- T. macrolepis (Kolombatovic, 1891) (Large-scaled goby)
   |  `-- T. rofeni Miller, 1988
   |?-o Tomiyamichthys [2]
   |  |-- T. alleni Iwata, Ohnishi & Hirata, 2000
   |  `-- T. oni (Tomiyama, 1936)
   |?- Tukugobius philippinus Herre, 1927
   |?-o Valenciennea [15]
   |  |-- V. alleni Hoese & Larson, 1994
   |  |-- V. bella Hoese & Larson, 1994
   |  |-- V. decora Hoese & Larson, 1994
   |  |-- V. helsdingenii (Bleeker, 1858) (Twostripe goby)
   |  |-- V. immaculata (Ni, 1981) (Red-lined sleeper)
   |  |-- V. limicola Hoese & Larson, 1994
   |  |-- V. longipinnis (Lay & Bennett, 1839) (Long-finned goby)
   |  |-- V. muralis (Valenciennes, 1837) (Mural goby)
   |  |-- V. parva Hoese & Larson, 1994
   |  |-- V. persica Hoese & Larson, 1994
   |  |-- V. puellaris (Tomiyama, 1956) (Maiden goby)
   |  |-- V. randalli Hoese & Larson, 1994
   |  |-- V. sexguttata (Valenciennes, 1837) (Sixspot goby)
   |  |-- V. strigata (Broussonet, 1782) (Blueband goby)
   |  `-- V. wardii (Playfair, 1867) (Ward's sleeper)
   |?-o Vanderhorstia [8]
   |  |-- V. ambanoro (Fourmanoir, 1957) (Twin-spotted shrimp-goby)
   |  |-- V. auropunctata (Tomiyama, 1955)
   |  |-- V. delagoae (Barnard, 1937) (Candystick goby)
   |  |-- V. fasciaventris (Smith, 1959)
   |  |-- V. lanceolata Yanagisawa, 1978
   |  |-- V. mertensi Klausewitz, 1974 (Mertens' prawn-goby)
   |  |-- V. ornatissima Smith, 1959 (Ornate prawn-goby)
   |  `-- V. prealta Lachner & McKinney, 1981 (Tall-fin shrimp-goby)
   |?-o Vanneaugobius [3]
   |  |-- V. canariensis Van Tassell, Miller & Brito, 1988
   |  |-- V. dollfusi Brownell, 1978
   |  `-- V. pruvoti (Fage, 1907)
   |?- Vomerogobius flavus Gilbert, 1971 (Lemon Goby)
   |?- Weberogobius amadi (Weber, 1913)
   |?-o Wheelerigobius [2]
   |  |-- W. maltzani (Steindachner, 1881)
   |  `-- W. wirtzi Miller, 1988 (Cameroon goby)
   |?-o Yongeichthys [3]
   |  |-- Y. criniger (Valenciennes, 1837)
   |  |-- Y. nebulosus (Forsskål, 1775) (Shadow goby)
   |  `-- Y. thomasi (Boulenger, 1916)
   |?- Zosterisessor ophiocephalus (Pallas, 1814) (Grass goby)
   `--+-- Oxudercinae (mudskippers; leijuryömijät) [N: 10/34]
      |-- Amblyopinae (eel gobies; ankeriastokot) [N: 10 genera]
      |-- Sicydiinae [N: 6 genera]
      |-- Gobionellinae [N: 56 genera]
      `-- Gobiinae [N: 130 genera]

Note:

Nelson recognized several subfamilies to the family, which are included, these subfamilies are not recogized by FishBase, where the species information has been obtained. This is why all those genera, which are not mentioned in Nelson, had been piled under Gobiidae.

 

Reference(s):