After Nowak, 1991 and Martin, Honey, Peláez-Campomanes, Goodwin, Baskin, & Zakrzewski, 2002

<==o Peromyscus Gloger, 1841 [taxonomic history] (White-footed mice, deer mice) [56?]
   |-- †P. antiquus
   |-- †P. baumgartneri Hibbard, 1954
   |-- †P. berendsensis
   |--+-- †P. cragini Hibbard, 1944
   |  `-- †P. progressus
   |-- †P. cumberlandensis
   |-- †P. irvingtonensis
   |-- †P. pliocenicus
   |--+-- †P. sawrockensis
   |  `-- †P. kansasensis Hibbard, 1941
   |?- P. nasutus ()?
   |--o (Haplomylomys) Osgood, 1904 ()?
   |  |-- P. (H.) eremicus (kaktushiiri)
   |  |-- P. (H.) eva ()?
   |  |-- P. (H.) merriami ()?
   |  |-- P. (H.) guardia ()?
   |  |-- P. (H.) interparietalis ()?
   |  |-- P. (H.) collatus ()?
   |  |-- P. (H.) dickeyi ()?
   |  |-- P. (H.) pembertoni ()?
   |  `-- P. (H.) californicus (kalifornianhiiri)
   `--o (Peromyscus) Gloger, 1841 ()? [45]
      |?- †P. (P.) cochrani
      |?- †P. (P.) complexus
      |?-+-- †P. (P.) hagermanensis Hibbard, 1962
      |  `-- †P. (P.) sarmocophinus Ruez, 2001
      |?- †P. (P.) maximus
      |?- †P. (P.) nosher Gustafson, 1978
      |-- P. (P.) hooperi ()?
      |--o P. (P.) polionotus ()?
      |  |-- P. (P.) p. polionotus ()?
      |  |-- P. (P.) p. ammobates ()?
      |  |-- P. (P.) p. trissyllepsis ()?
      |  |-- P. (P.) p. allophyrys ()?
      |  |-- P. (P.) p. niveiventris ()?
      |  |-- P. (P.) p. phasma ()?
      |  `-- [†?]P. (P.) p. decoloratus ()?
      |-- P. (P.) maniculatus (peurahiiri)
      |-- P. (P.) sejugis ()?
      |-- P. (P.) slevini ()?
      |-- †P. (P.) nesodytes ()?
      |-- P. (P.) oreas ()?
      |-- P. (P.) sitkensis ()?
      |-- P. (P.) melanotis ()?
      |-- P. (P.) leucopus (valkojalkahiiri)
      |--o P. (P.) gossypinus ()?
      |  |-- P. (P.) g. gossypinus ()?
      |  |-- P. (P.) g. allapaticola ()?
      |  `-- P. (P.) g. restrictus ()?
      |-- P. (P.) crinitus ()?
      |-- P. (P.) caniceps ()?
      |-- P. (P.) pseudocrinitus ()?
      |-- P. (P.) pectoralis ()?
      |-- P. (P.) boylii ()?
      |-- P. (P.) levipes ()?
      |-- P. (P.) beatae ()?
      |-- P. (P.) spicilegus ()?
      |-- P. (P.) simulus ()?
      |-- P. (P.) madrensis ()?
      |-- P. (P.) attwateri ()?
      |-- P. (P.) polius ()?
      |-- P. (P.) stephani ()?
      |-- P. (P.) aztecus ()?
      |-- P. (P.) winkelmanni ()?
      |--o P. (P.) truei ()?
      |  |-- P. (P.) t. truei ()?
      |  `-- P. (P.) t. comanche ()?
      |-- P. (P.) gratus ()?
      |-- P. (P.) difficilis ()?
      |-- P. (P.) bullatus ()?
      |-- P. (P.) perfulvus ()?
      |-- P. (P.) melanophrys ()?
      |-- P. (P.) mekisturus ()?
      |-- P. (P.) ochraventer ()?
      |-- P. (P.) yucatanicus (jukataninpeurahiiri)
      |-- P. (P.) mexicanus ()?
      |-- P. (P.) gymnotis ()?
      |-- P. (P.) mayensis ()?
      |-- P. (P.) stirtoni ()?
      |-- P. (P.) furvus ()?
      |-- P. (P.) guatemalensis ()?
      |-- P. (P.) megalops ()?
      |-- P. (P.) melanocarpus ()?
      |-- P. (P.) melanurus ()?
      |-- P. (P.) zarhynchus ()?
      `-- P. (P.) grandis ()?

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