After Welch, 1994, Uetz, Etzold & Chenna, 1995-2000 [“The TIGR Reptile Database ” (former EMBL Reptile Database)], and Brown, Supriatna & Ota, 2000

<==o Gekkonini [34/404]
   |--o Agamura
   |  |-- A. femoralis Smith, 1933
   |  |-- A. gastropholis Werner, 1917
   |  |-- A. misonnei de Witte, 1973
   |  `-- A. persica Duméril, 1856
   |--o Ailuronyx
   |  |-- A. seychellensis Duméril & Bibron, 1836
   |  |-- A. tachyscopaeus Gerlach & Canning, 1996
   |  `-- A. trachygaster Duméril, 1851
   |--o Alsophylax
   |  |-- A. boehmei Shcherbak, 1991
   |  |-- A. laevis Nikolsky, 1907
   |  |-- A. loricatus Strauch, 1887
   |  |-- A. pipiens Pallas, 1827
   |  |-- A. przewalskii Strauch, 1887
   |  |-- A. tadjikiensis Golubev, 1979
   |  `-- A. tokobajevi Yeriomtschenko & Szczerbak, 1984
   |--o Blaesodactylus Boettger, 1893 [Homopholis]
   |  |-- B. antongilensis
   |  |-- B. boivini
   |  `-- B. sakalava
   |-- Bogertia lutzae Loveridge, 1941
   |-- Briba brasiliana Amaral, 1935
   |--o Bunopus
   |  |-- B. blanfordii Strauch, 1887
   |  |-- B. crassicauda Nikolsky, 1907
   |  |-- B. spatalurus Anderson, 1901
   |  `-- B. tuberculatus Blanford, 1874
   |-- Calodactylus [not recognized by EMBL Reptile Database]
   |--o Carinatogecko
   |  |-- C. aspratilis Anderson, 1973
   |  `-- C. heteropholis Minton et al., 1970
   |-- Cnemaspis
   |-- Cosymbotes [not recognized by EMBL Reptile Database]
   |--o Crossobamon
   |  |-- C. eversmanni Wiegmann, 1834
   |  `-- C. orientalis Blanford, 1876
   |--o Cyrtopodion
   |  |-- C. agamuroides Nikolsky, 1900
   |  |-- C. chitralensis Smith, 1935
   |  |-- C. elongatus Blanford, 1875
   |  |-- C. fortmunroi Khan, 1993
   |  |-- C. kachhensis Stoliczka, 1872
   |  |-- C. kirmanensis Nikolsky, 1900
   |  |-- C. scaber Heyden, 1827
   |  `-- C. watsoni Murray, 1892
   |-- Dravidogecko [not recognized by EMBL Reptile Database]
   |--o Geckolepis
   |  |-- G. anomala Mocquard, 1902
   |  |-- G. maculata Peters, 1881
   |  |-- G. petiti Angel, 1942
   |  |-- G. polylepis Boettger, 1893
   |  `-- G. typica Grandidier, 1867
   |-- Gehyra
   |-- Gekko
   |--o Gonydactylus
   |  |-- G. markuscombaii Darevsky, Helfenberger, Orlov & Shah, 1998
   |  |-- G. martinstolli Darevsky, Helfenberger, Orlov & Shah, 1998
   |  |-- G. nepalensis Schleich & Kästle, 1998
   |  `-- G. paradoxus Darevsky & Szczerbak, 1997
   |--o Gymnodactylus
   |  |-- G. darwinii Gray 1845
   |  |-- G. geckoides Spix 1825
   |  `-- G. guttulatus Vanzolini 1982
   |-- Hemidactylus
   |--o Hemiphyllodactylus
   |  |-- H. aurantiacus Beddome, 1870
   |  |-- H. larutensis Boulenger, 1900
   |  |-- H. typus Bleeker, 1860
   |  `-- H. yunnanensis Boulenger, 1903
   |--o Heteronotia
   |  |-- H. binoei Gray, 1845
   |  |-- H. planiceps Storr, 1989
   |  `-- H. spelea Kluge, 1963
   |-- Homopholis [not recognized by EMBL Reptile Database]
   |-- Lepidodactylus
   |--o Luperosaurus
   |  |--+-- L. brooksii (Boulenger, 1920) [Gekko brooksii]
   |  |  |-- L. browni Russell, 1979 [L. serraticaudus Ota, Sengoku & Hikida, 1996]
   |  |  `-- L. iskandari Brown, Supriatna & Ota, 2000
   |  `--+--+-- L. yasumai Ota, Sengoku & Hikida, 1996
   |     |  `-- L. joloensis Taylor, 1918
   |     `--+-- L. palawanensis Brown & Alcala, 1978
   |        |-- L. cumingii Gray, 1845
   |        `-- L. macgregori Stejneger, 1907
   |-- Lygodactylus Gray, 1864 [incl. Millotisaurus Pasteur, 1962] (African Dwarf Geckos)
   |--o Perochirus
   |  |-- P. ateles Duméril, 1856
   |  |-- P. guentheri Boulenger, 1885
   |  `-- P. scutellatus Fischer, 1882
   |--o Phyllopezus
   |  |-- P. periosus Rodrigues, 1986
   |  `-- P. pollicaris Spix, 1825
   |--o Pseudogekko
   |  |-- P. brevipes Boettger, 1897
   |  |-- P. compressicorpus Taylor, 1915
   |  |-- P. labialis Peters, 1868
   |  `-- P. smaragdinus Taylor, 1922
   |--o Ptychozoon
   |  |-- P. horsfieldii Gray, 1827
   |  |-- P. intermedium Taylor, 1915
   |  |-- P. kuhli Stejneger, 1902
   |  |-- P. lionotum Annandale, 1905
   |  |-- P. rhacophorus Boulenger, 1899
   |  `-- P. trinOtaterra Brown, 1999
   |--o Stenodactylus
   |  |-- S. affinis Murray, 1884
   |  |-- S. arabicus Haas, 1957
   |  |-- S. doriae Blanford, 1874
   |  |-- S. grandiceps Haas, 1952
   |  |-- S. khobarensis Haas, 1957
   |  |-- S. leptocosymbotus Leviton & Anderson, 1967
   |  |-- S. petrii Anderson, 1896
   |  |-- S. pulcher Anderson, 1896
   |  |-- S. slevini Haas, 1957
   |  |-- S. sthenodactylus Lichtenstein, 1823
   |  `-- S. yemenensis Arnold, 1980
   |--o Tenuidactylus
   |  |-- T. baturensis Khan & Baig, 1992
   |  |-- T. caspius Eichwald, 1831
   |  |-- T. fedtschenkoi Strauch, 1887
   |  |-- T. indusoani Khan, 1988
   |  |-- T. kohsulaimani Khan, 1991
   |  |-- T. longipes Nikolsky, 1896
   |  |-- T. montiumsalsorum Annandale, 1913
   |  |-- T. rhodocaudus Baig, 1998
   |  |-- T. rohtasforti Khan & Tasnim, 1990
   |  |-- T. turcmenicus Szczerbak, 1978
   |  `-- T. voraginosus Leviton & Anderson, 1984
   |--o Teratolepis
   |  |-- T. albofasciatus Grandison & Soman, 1963
   |  `-- T. fasciata Blyth, 1854
   |--o Thecadactylus Houttuyn, 1782
   |  |-- T. rapicauda Houttuyn, 1782 [T. rapicaudus] (turnip-tailed gekko; naurishäntägekko)
   |  `-- T. solimoensis Bergmann & Russell, 2007
   |--o Tropiocolotes
   |  |-- T. nattereri Steindachner, 1901
   |  |-- T. nubicus Baha el Din, 1999
   |  |-- T. Scortecci Cherchi & Spano, 1963
   |  |-- T. steudneri Peters, 1869
   |  `-- T. tripolitanus Peters, 1880
   |--o Urocotyledon
   |  |-- U. inexpectata Stejneger, 1893
   |  |-- U. palmata Mocquard, 1902
   |  |-- U. weileri Müller, 1909
   |  `-- U. wolterstorff Tornier, 1900
   `--o Uroplatus
      |-- U. alluaudi Mocquard, 1894
      |-- U. ebenaui Boettger, 1879
      |-- U. fimbriatus Schneider, 1797
      |-- U. guentheri Mocquard, 1908
      |-- U. henkeli Böhme & Ibisch, 1990
      |-- U. lineatus Duméril & Bibron, 1836
      |-- U. malahelo Nussbaum & Raxworthy, 1994
      |-- U. malama Nussbaum & Raxworthy, 1995
      |-- U. phantasticus Boulenger, 1888
      `-- U. sikorae Boettger, 1913

Reference(s):