After Pyron, Burbrink & Wiens, 2013, with species from Welch, 1994, and Uetz, Etzold & Chenna, 1995-2018 [“The Reptile Database]

<==o Diplodactylidae sensu Pyron, Burbrink & Wiens, 2013 [Pygopodidae: Diplodactylinae: Diplodactylini]
   |--+--o Pseudothecadactylus
   |  |  |?- P. australis (Günther, 1877)
   |  |  |?- P. cavaticus Cogger, 1975
   |  |  `-- P. lindneri Cogger, 1975
   |  `--+-- Rhacodactylus trachyrhynchus Bocage, 1873
   |     |?- Rhacodactylus trachycephalus (Boulenger, 1878)
   |     `--+-- Oedodera marmorata Bauer, Jackman, Sadlier & Whitaker, 2006
   |        `--+--o Deirogekko
   |           |  |?- D. baaba Skipwith, Jackman, Whitaker, Bauer & Sadlier, 2014
   |           |  |-- D. poumensis Bauer, Jackman, Sadlier & Whitaker, 2006
   |           |  `--+--+-- D. inexpectatus Bauer, Jackman, Sadlier & Whitaker, 2006
   |           |     |  `--+-- D. validiclavis (Sadlier, 1988)
   |           |     |     `-- D. nehoueensis Bauer, Jackman, Sadlier & Whitaker, 2006
   |           |     `--+-- D. insularis Bauer, Jackman, Sadlier & Whitaker, 2006
   |           |        `--+-- D. koniambo Bauer, Jackman, Sadlier & Whitaker, 2006
   |           |           `--+-- D. thomaswhitei Bauer, Jackman, Sadlier & Whitaker, 2006
   |           |              `-- D. kaalaensis Bauer, Jackman, Sadlier & Whitaker, 2006
   |           `==o Bavayia
   |              |?- Bavayia crassicollis Roux, 1913
   |              |?- Bavayia exsuccida Bauer, Whitaker & Sadlier, 1998
   |              |?- Bavayia nubila Bauer, Sadlier, Jackman & Shea, 2012
   |              |?- Bavayia robusta Wright, Bauer & Sadlier, 2000
   |              |?- Bavayia septuiclavis Sadlier, 1989
   |              |?- Bavayia validiclavis Sadlier, 1988
   |              |--+-- Bavayia pulchella Bauer, Whitaker & Sadlier, 1998
   |              |  `--+-- Bavayia sauvagii Boulenger, 1883
   |              |     `-- Bavayia geitaina Wright, Bauer & Sadlier, 2000
   |              `--+--+--+-- Rhacodactylus leachianus (Cuvier, 1829)
   |                 |  |  `-- Paniegekko madjo (Bauer, Jones & Sadlier, 2000)
   |                 |  `--+-- Bavayia ornata Roux, 1913
   |                 |     `--+-- Bavayia goroensis Bauer, Jackman, Sadlier, Shea & Whitaker, 2008
   |                 |        `--+-- Bavayia montana Roux, 1913
   |                 |           `-- Bavayia cyclura Günther, 1872
   |                 `--+-- Rhacodactylus auriculatus Bavay, 1869
   |                    `--+--o Correlophus
   |                       |  |?- C. belepensis Bauer, Whitaker, Sadlier & Jackman, 2012
   |                       |  |-- C. ciliatus Guichenot, 1866
   |                       |  `-- C. sarasinorum (Roux, 1913)
   |                       `==o Eurydactylodes
   |                          |--+-- Eurydactylodes symmetricus Andersson, 1908
   |                          |  `--o Mniarogekko
   |                          |     |-- M. chahoua (Bavay, 1869)
   |                          |     `?- M. jalu Bauer, Whitaker, Sadlier & Jackman, 2012
   |                          `--+-- Eurydactylodes occidentalis Bauer, Jackman, Sadlier & Whitaker, 2009
   |                             `--+-- Eurydactylodes vieillardi Bavay, 1869
   |                                `-- Eurydactylodes agricolae Henkel & Böhme, 2001 
   `--+--o Crenadactylus
      |  |?- C. horni (Lucas & Frost, 1895)
      |  |?- C. naso (Storr, 1978)
      |  |?- C. occidentalis Doughty, Ellis & Oliver, 2016
      |  |?- C. pilbarensis Doughty, Elllis & Oliver, 2016
      |  |?- C. rostralis (Storr, 1978)
      |  |?- C. tuberculatus Doughty, Ellis & Oliver, 2016
      |  `-- C. ocellatus Gray, 1845
      `--+--+--+--o Hoplodactylus
         |  |  |  |?- H. delcourti Bauer & Russell, 1986
         |  |  |  `-- H. duvaucelii Duméril & Bibron, 1836
         |  |  `--o Woodworthia
         |  |     |?- W. brunnea (Cope, 1869)
         |  |     |-- W. chrysosiretica (Robb, 1980) [Hoplodactylus chrysosireticus Robb, 1980]
         |  |     `-- W. maculata (Gray, 1845) [Hoplodactylus maculatus Gray, 1845]
         |  `--+--+-- Dactylocnemis pacificus (Gray, 1842) [Hoplodactylus pacificus Gray, 1842]
         |     |  `-- Toropuku stephensi (Robb, 1980) [Hoplodactylus stephensi Robb, 1980]
         |     `--+--o Mokopirirakau
         |        |  |--+-- M. kahutarae (Whitaker, 1985) [Hoplodactylus kahutarae Whitaker, 1985]
         |        |  |  `-- M. granulatus (Gray, 1845) [Hoplodactylus granulatus Gray, 1845]
         |        |  `--+-- M. nebulosus (McCann, 1955)
         |        |     `-- M. cryptozoicus (Jewell & Leschen, 2004)
         |        `--+-- Tukutuku rakiurae (Thomas, 1981) [Hoplodactylus rakiurae Thomas, 1981]
         |           `--o Naultinus
         |              |?- N. punctatus Gray, 1843
         |              |-- N. gemmeus McCann, 1955
         |              `--+--+-- N. grayii Bell, 1843
         |                 |  `-- N. elegans Gray, 1842
         |                 `--+--+-- N. stellatus Hutton, 1872
         |                    |  `-- N. tuberculatus McCann, 1955
         |                    `--+-- N. manukanus McCann, 1955
         |                       `--+-- N. poecilochlorus Robb, 1980
         |                          `-- N. rudis Fischer, 1881
         `--+--+--+-- Nebulifera robusta (Boulenger, 1885) [Oedura robusta Boulenger, 1885]
            |  |  `-- Strophurus taenicauda (De Vis, 1886)
            |  `--o Amalosia
            |     |?- A. jacovae (Couper, Keim & Hoskin, 2007)
            |     |-- A. lesueurii (Duméril & Bibron, 1836) [Oedura lesueurii Duméril & Bibron, 1836]
            |     `--+-- A. obscura (King, 1985) [Oedura obscura King, 1985]
            |        `-- A. rhombifer (Gray, 1845) [Oedura rhombifer Gray, 1845]
            `--+-- Hesperoedura reticulata (Bustard, 1969) [Oedura reticulata Bustard, 1969]
               `--+--+--o Oedura
                  |  |  |?- O. bella Oliver & Doughty, 2016
                  |  |  |?- O. cincta De Vis, 1888
                  |  |  |?- O. fimbria Oliver & Doughty, 2016
                  |  |  |?- O. jowalbinna Hoskin & Higgie, 2008
                  |  |  |?- O. luritja Oliver & McDonald, 2016
                  |  |  |?- O. murrumanu Oliver, Laver, Melville & Doughty, 2014
                  |  |  |--+--+-- O. gemmata King & Gow, 1983
                  |  |  |  |  `-- O. marmorata Gray, 1842
                  |  |  |  `--+-- O. filicipoda King, 1985
                  |  |  |     `-- O. gracilis King, 1985
                  |  |  `--+--+-- O. castelnaui Thominot, 1889 [in partim]
                  |  |     |  `-- O. coggeri Bustard, 1966
                  |  |     `--+-- O. monilis de Vis, 1888
                  |  |        `-- O. tryoni de Vis, 1884
                  |  `--o Strophurus
                  |     |?- S. congoo VanDerDuys, 2016
                  |     |?- S. horneri Oliver & Parkin, 2014
                  |     |?- S. michaelseni (Werner, 1910)
                  |     |?- S. robinsoni (Smith, 1995)
                  |     |?- S. trux VanDerDuys, 2017
                  |     |?- S. wilsoni (Storr, 1983)
                  |     |-- S. mcmillani (Storr, 1978)
                  |     `--+-- S. taeniatus (Lönnberg & Andersson, 1913)
                  |        `--+--+-- S. jeanae (Storr, 1988)
                  |           |  `-- S. elderi(Stirling & Zietz, 1893)
                  |           `--+--+-- S. assimilis (Storr, 1988) [Diplodactylus assimilis Storr, 1988]
                  |              |  `-- S. strophurus (Duméril & Bibron, 1836)
                  |              `--+-- S. krisalys Sadlier, 2005
                  |                 `--+--+-- S. wellingtonae (Storr, 1988)
                  |                    |  `-- S. ciliaris (Boulenger, 1885) [Diplodactylus ciliaris Boulenger, 1885]
                  |                    `--+-- S. williamsi (Kluge, 1963)
                  |                       `--+-- S. intermedius (Ogilby, 1892)
                  |                          `--+-- S. spinigerus (Gray, 1842)
                  |                             `-- S. rankini (Storr, 1979)
                  `--+--+--o Rhynchoedura
                     |  |  |?- R. angusta Pepper, Doughty, Hutchinson & Keogh, 2011
                     |  |  |?- R. eyrensis Pepper, Doughty, Hutchinson & Keogh, 2011
                     |  |  |?- R. mentalis Pepper, Doughty, Hutchinson & Keogh, 2011
                     |  |  |?- R. ormsbyi Wells & Wellington, 1985
                     |  |  |?- R. sexapora Pepper, Doughty, Hutchinson & Keogh, 2011
                     |  |  `-- Rhynchoedura ornata Günther, 1867
                     |  `--o Lucasium
                     |     |?- L. bungabinna Doughty & Hutchinson, 2008
                     |     |?- L. occultum (King, 1982)
                     |     |-- L. byrnei (Lucas & Frost, 1896) [Diplodactylus byrnei Lucas & Frost, 1896]
                     |     `--+--+-- L. alboguttatum (Werner, 1910) [Diplodactylus alboguttatus Werner, 1910]
                     |        |  `--+-- L. damaeum (Lucas & Frost, 1896)
                     |        |     `-- L. maini (Kluge, 1962)
                     |        `--+--+-- L. steindachneri (Boulenger, 1885)
                     |           |  `-- L. immaculatum (Storr, 1988)
                     |           `--+-- L. wombeyi (Storr, 1978)
                     |              `--+-- L. squarrosum (Kluge, 1962)
                     |                 `-- L. stenodactylum (Boulenger, 1896)
                     `--o Diplodactylus
                        |?- D. ameyi Couper & Oliver, 2016
                        |?- D. barraganae Couper, Oliver & Pepper, 2014
                        |?- D. bilybara Couper, Pepper & Oliver, 2014
                        |?- D. calcicolus Hutchinson, Doughty & Oliver, 2009
                        |?- D. custos Couper, Oliver & Pepper, 2014
                        |?- D. furcosus Peters, 1863
                        |?- D. galaxias Doughty, Pepper & Keogh, 2010
                        |?- D. hillii Longman, 1915
                        |?- D. kenneallyi Storr, 1988
                        |?- D. laevis Sternfeld, 1925
                        |?- D. lateroides Doughty & Oliver, 2013
                        |?- D. nebulosus Doughty & Oliver, 2013
                        |?- D. platyurus Parker, 1926
                        |?- D. wiru Hutchinson, Doughty & Oliver, 2009
                        |--+-- D. granariensis Storr, 1979
                        |  `--+-- D. fulleri Storr, 1978
                        |     `--+-- D. vittatus Gray, 1832
                        |        `--+-- D. tessellatus (Günther, 1875)
                        |           `-- D. galeatus Kluge, 1963
                        `--+--+-- D. polyophthalmus Günther, 1867
                           |  `--D. ornatus Gray, 1845
                           `--+-- D. conspicillatus Lucas & Frost, 1897
                              `--+--+-- D. capensis Doughty, Oliver & Adams, 2008
                                 |  `-- D. mitchelli Kluge, 1963
                                 `--+-- D. savagei Kluge, 1963
                                    `--+-- D. klugei Aplin & Adams, 1998
                                       `-- D. pulcher (Steindachner, 1870)

After Welch, 1994

<==o Diplodactylini
   |-- Crenadactylus ocellatus Gray, 1845
   |--o Diplodactylus [5]
   |  |-- D. alboguttatus Werner, 1910
   |  |-- D. assimilis Storr, 1988
   |  |-- D. byrnei Lucas & Frost, 1896
   |  |-- D. ciliaris Boulenger, 1885
   |  `-- D. conspicillatus Lucas & Frost, 1897
   |--o Oedura [13]
   |  |-- O. castelnaui Thominot, 1889 [in partim]
   |  |-- O. coggeri Bustard, 1966
   |  |-- O. filicipoda King, 1985
   |  |-- O. gemmata King & Gow, 1983
   |  |-- O. gracilis King, 1985
   |  |-- O. lesueurii Duméril & Bibron, 1836
   |  |-- O. marmorata Gray, 1842
   |  |-- O. monilis de Vis, 1888
   |  |-- O. obscura King, 1985
   |  |-- O. reticulata Bustard, 1969
   |  |-- O. rhombifer Gray, 1845 [in partim]
   |  |-- O. robusta Boulenger, 1885
   |  `-- O. tryoni de Vis, 1884
   `-- Rhynchoedura ornata Günther, 1867

Reference(s):